我对python很陌生(任何类型的编码都是如此)。所以我很抱歉如果有点混乱的话
我有一个csv文件,如下所示
A B C D E F G H
14 BP1 BP1-19119308 OR1A1 19119308 chip-chip Hs578T human 11/23/09
15 BP1 BP1-19119308 PTPRE 19119308 chip-chip Hs578T human 11/23/09
16 BP1 BP1-19119308 SELE 19119308 chip-chip Hs578T human 11/23/09
17 BP1 BP1-19119308 TAC3 19119308 chip-chip Hs578T human 11/23/09
18 BP1 BP1-19119308 VEGFA 19119308 chip-chip Hs578T human 11/23/09
19 CHD7 CHD7-19251738 APOA1 19251738 chip-chip MESC mouse 11/23/09
20 CHD7 CHD7-19251738 ARHGAP26 19251738 chip-chip MESC mouse 11/23/09我得让它看起来像这样
BP1-19119308-chip-chip-Hs578T-human OR1A1 PTPRE SELE TAC3 VEGFA
CHD7-19251738-chip-chip-MESC-mouse APOA1 ARHGAP26在第一栏中,我确实做到了
import csv
out = open ('test.csv','rt', encoding='utf8')
data = csv.reader(out)
output = csv.writer(out)
data = [row for row in data]
new_data = [[row[2]+'-'+row[5]+'-'+row[6] +'-'+ row[7], row[3]] for row in data]
print (new_data)
out = open('new_data.csv','wt')
output = csv.writer(out)
for row in new_data:
output.writerow(row)
out.close()
A B
BP1-19119308-chip-chip-Hs578T-human OR1A1
BP1-19119308-chip-chip-Hs578T-human PTPRE
BP1-19119308-chip-chip-Hs578T-human SELE
BP1-19119308-chip-chip-Hs578T-human TAC3
BP1-19119308-chip-chip-Hs578T-human VEGFA
CHD7-19251738-chip-chip-MESC-mouse APOA1
CHD7-19251738-chip-chip-MESC-mouse ARHGAP26
CHD7-19251738-chip-chip-MESC-mouse ATP11A但是现在我在A中有了这些副本,我不知道如何删除它们,并将分配给这些副本的B中的所有值转位。
我再次尝试循环,将当前值与前一个值进行比较,我只是把整件事情搞砸了。
有什么建议吗?
发布于 2015-10-31 21:31:40
你想用字典。如果要进一步分析,请将聚合值保存在每个标识符的列表中。标识符字符串是一个键,每个键下都有一个值列表。
new_keys = [row[2] + '-' + row[5] + '-' + row[6] + '-' + row[7] for row in data]
new_values = [row[3] for row in data]
aggregate_values = {} # An empty dictionary
# Iterate across the paired lists together
for key, value in zip(new_keys, new_values):
if key not in aggregate_values:
aggregate_values[key] = [value]
else:
aggregate_values[key].append(value)
# printed output
for key in aggregate_values:
print key + " " + " ".join(aggregate_values[key])发布于 2015-10-31 21:16:46
一种解决方案是在对数据进行分组时使用字典:
import csv
out = open ('test.csv','rt', encoding='utf8')
data = csv.reader(out)
output = csv.writer(out)
data = [row for row in data]
new_data = [[row[2]+'-'+row[5]+'-'+row[6] +'-'+ row[7], row[3]] for row in data]
my_dict = {}
for row in new_data:
if row[0] in my_dict:
my_dict[row[0]] += " " + row[1]
else:
my_dict[row[0]] = row[1]
new_data = [[my_key,my_dict[my_key]] for my_key in my_dict]
print (new_data)
out = open('new_data.csv','wt')
output = csv.writer(out)
for row in new_data:
output.writerow(row)
out.close()发布于 2015-11-01 04:14:30
从你所拥有的那一点开始:
test.txt
A B
BP1-19119308-chip-chip-Hs578T-human OR1A1
BP1-19119308-chip-chip-Hs578T-human PTPRE
BP1-19119308-chip-chip-Hs578T-human SELE
BP1-19119308-chip-chip-Hs578T-human TAC3
BP1-19119308-chip-chip-Hs578T-human VEGFA
CHD7-19251738-chip-chip-MESC-mouse APOA1
CHD7-19251738-chip-chip-MESC-mouse ARHGAP26
CHD7-19251738-chip-chip-MESC-mouse ATP11A现在,您可以使用以下代码将所需的形状呈现出来:
with open("test.txt") as f:
data = f.readlines()[1:]
mydata = [x.strip() for x in data]
final = {}
for x in mydata:
k, v = x.split()
if final.has_key(k):
l = final[k]
l.append(v)
else:
final[k] = [v]
for d in final:
print d, " ".join(final[d])输出:
CHD7-19251738-chip-chip-MESC-mouse APOA1 ARHGAP26 ATP11A
BP1-19119308-chip-chip-Hs578T-human OR1A1 PTPRE SELE TAC3 VEGFA从这里开始,如果需要,可以将其写入文件中。
https://stackoverflow.com/questions/33456550
复制相似问题