我在R中工作,试图使用for循环生成几个不同的向量。
首先,我创建了一个名为df的小型可重现示例数据帧。
cluster.assignment <- c("1 Unknown", "1 Unknown", "2 Neuron","3
PBMC","4 Basket")
Value1 <- c("a","b","c","d","e")
Value2 <- c("191","234","178","929","123")
df <- data.frame(cluster.assignment,Value1,Value2)df
cluster.assignment Value1 Value2
1 1 Unknown a 191
2 1 Unknown b 234
3 2 Neuron c 178
4 3 PBMC d 929
5 4 Basket e 123 . 接下来,我创建了一个名为clusters的变量,其中包含我感兴趣的数据集的键。
clusters <- c("1 ","4 ")下面是我使用for循环在df中提取感兴趣数据的行名的尝试。
for (COI in clusters) {
name2 <- c(gsub(" ","", paste("Cluster", COI, sep = "_")))
assign(Cluster_1, name2, envir = parent.frame())
name2 <- grep(COI, df$cluster.assignment)
}期望的输出是两个称为Cluster_1和Cluster_4的向量。
Cluster_1将包含值1和2
Cluster_4将包含值5
我似乎不知道如何将COI变量的名称指定为输出向量的名称。
发布于 2018-09-05 03:11:23
我建议不要使用assign。相反,我将创建一个命名列表。See this answer for a long discussion of why lists are better than sequentially named variables。如果您在任何时候决定要将列表转换为全局环境中的对象,可以使用list2env,但这样做可能只会做更多工作。
## subset the data to the parts we care about, use `split` to separate it
## into a list
subdf = df[grepl(paste(clusters, collapse = "|"), df$cluster.assignment), ]
result = split(subdf, subdf$cluster.assignment, drop = TRUE)
result
# $`1 Unknown`
# cluster.assignment Value1 Value2
# 1 1 Unknown a 191
# 2 1 Unknown b 234
#
# $`4 Basket`
# cluster.assignment Value1 Value2
# 5 4 Basket e 123
## name the list as desired
names(result) = paste("Cluster", trimws(clusters), sep = "_")
result
# $`Cluster_1`
# cluster.assignment Value1 Value2
# 1 1 Unknown a 191
# 2 1 Unknown b 234
#
# $Cluster_4
# cluster.assignment Value1 Value2
# 5 4 Basket e 123
## if only the row names are needed, use lapply
result = lapply(result, row.names)
result
# $`Cluster_1`
# [1] "1" "2"
#
# $Cluster_4
# [1] "5"其他一些注意事项-我假设你在clusters中包含了空格,以防止,例如,"1"匹配"12 foo"。您可以考虑改用正则表达式单词边界"\\b1\\b",因为"1 "仍然会匹配,比方说"11 foo"或"21 bar"。更好的是,您可以使用strplit或类似的命令来创建一个新列,其中只包含您想要匹配的数字键。
发布于 2018-09-05 03:04:55
我认为没有必要为此创建一个for循环,除非您有自己的原因,但以下代码可以满足您的需求:
library(data.table)
Cluster_1<-df[df$cluster.assignment %like% "1 ", c("Value1", "Value2")]
Cluster_2<-df[df$cluster.assignment %like% "4 ", c("Value1", "Value2")]
View(Cluster_1);View(Cluster_2)您可以删除或更改c("Value1","Value2"),以获得在最终输出中需要的列。
https://stackoverflow.com/questions/52172341
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